ALEKS is painful..

[lacussucceed]

I'm not 100% sure, but if I recall correctly you can choose which credits you want to include when ordering a ACE transcript.

ACE is just a complete transcript option.  SL's free direct transcript offers a choice.  I really would not worry about have duplicates; I'd only worry about what seems missing. Plus in the long run one school some day you're interested in might only take the precal as valid, and not the algebra - always best to have your transcript complete.  Many of us here have courses duplicated on our ACE transcript from when the Alternative Credit Project (APC) was active; some (non Big3) school's would take the credit if only if APC but not the (literally) same course from SL, Saylor, Sophia etc

You are correct, ACE does not offer that choice.